PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05963

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 583aa MW: 65122.1 Da PI: 4.6346

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05963	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.8	3.6e-21	239	287	5	54
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt eLH++F+eav+qL G+ + Pk+ilelm+v+gLt+ +v+SHLQk R OIT05963 239 EWTLELHAKFLEAVAQL-GEGRCYPKEILELMDVPGLTRMQVASHLQKCR 287 7**************.9***************************98 PP
2	Myb_DNA-binding	36.1	1.5e-11	239	286	3	47
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT e++ ++++av+qlG g +k I + m g+t+ q+ s++qk OIT05963 239 EWTLELHAKFLEAVAQLGEGrcYPKEILELMDvPGLTRMQVASHLQKC 286 6*********************************************97 PP
3	Response_reg	30.3	2.2e-11	30	134	1	106
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 v++vd ++ + +le+++y +v+++ +e a+++l + + +D++++ p++ +ll + + + + i+v + +++ +a++al+ Ga OIT05963 30 VMLVDHDQETIYEMVDLLESHKY-KVTTVGAAEMAMNMLSKGKerYDVMIINAYSPDLLSTRLLGQAVALD--IISILVCDDNNPLLAKKALDDGAY 123 8999999999*******.***********777667********98888888777766..666777788889******** PP EEEESS--HHH CS Response_reg 96 dflsKpfdpee 106 +l Kp ++e OIT05963 124 LYLKKPLQEEM 134 ****77654 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MSQQEINNQP NEGLVNPMAP YNGMINEVRV MLVDHDQETI YEMVDLLESH KYKVTTVGAA 60 EMAMNMLSKG KERYDVMIIN AYSPDLLSTR LLGQAVALDI ISILVCDDNN PLLAKKALDD 120 GAYLYLKKPL QEEMVKYLWQ FVLKEELQRE KVKKVLENGE NMIINIGDDD ETGENFGDEQ 180 GEKSMGNDEE QNNNHEVENS ESNGKYKLRK KRGRKSTKDA NQGDSHSGGK SIKRKVCTEW 240 TLELHAKFLE AVAQLGEGRC YPKEILELMD VPGLTRMQVA SHLQKCRNDN WRAPKERKSS 300 RNSSGQGSSS GSQQQSGHRK FGSMPRIQPN IVTNLQQQQR DQEFDQRSPP EFQFPPLNNS 360 NIIVRGESST QQEQAYHPQL PHVEPQYLSI GSPFNNPNFT QNNAGGFVQQ QQHGPFVGMM 420 GQGQGPIIEG TNYRPEFPIN NGPDQHAQNG YNMNVNAAHF VYSGGPMISD MNGNVTMNGL 480 GFAEAAANAN FQQQYGQPSM TEPSNFVAPS NVSDSEGTDS NEGQNCDQYF DFNDVDYLFQ 540 NLGPPTSNLP NEQGTEFSPV YSDDQVKPSV PFPGIANFPD DLA

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MSQQEINNQP NEGLVNPMAP YNGMINEVRV MLVDHDQETI YEMVDLLESH KYKVTTVGAA  60
EMAMNMLSKG KERYDVMIIN AYSPDLLSTR LLGQAVALDI ISILVCDDNN PLLAKKALDD  120
GAYLYLKKPL QEEMVKYLWQ FVLKEELQRE KVKKVLENGE NMIINIGDDD ETGENFGDEQ  180
GEKSMGNDEE QNNNHEVENS ESNGKYKLRK KRGRKSTKDA NQGDSHSGGK SIKRKVCTEW  240
TLELHAKFLE AVAQLGEGRC YPKEILELMD VPGLTRMQVA SHLQKCRNDN WRAPKERKSS  300
RNSSGQGSSS GSQQQSGHRK FGSMPRIQPN IVTNLQQQQR DQEFDQRSPP EFQFPPLNNS  360
NIIVRGESST QQEQAYHPQL PHVEPQYLSI GSPFNNPNFT QNNAGGFVQQ QQHGPFVGMM  420
GQGQGPIIEG TNYRPEFPIN NGPDQHAQNG YNMNVNAAHF VYSGGPMISD MNGNVTMNGL  480
GFAEAAANAN FQQQYGQPSM TEPSNFVAPS NVSDSEGTDS NEGQNCDQYF DFNDVDYLFQ  540
NLGPPTSNLP NEQGTEFSPV YSDDQVKPSV PFPGIANFPD DLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	235	RKKRGRKSTKDANQGDSHSGGKSIKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	7e-30	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIT05963