PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05938

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 367aa MW: 42083.2 Da PI: 4.8861

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05938	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.6	4.5e-13	67	155	1	95
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+l ++d +s+ l +pk+ a+ + +s +l+ d+ + We+ l+ ++ ++r + +t+ WkeFv++n+Lk++D vv++ + +e++l+++ OIT05938 67 FEKQL-TEDDITSDHLQIPKRMANYI-----QSLELQRADPGEKYWEMDLQLDNWGDReCQFTGQWKEFVNENKLKAKDLVVIEIFN-NEKRLKIG 155 89999.666666667*****9333.....4568999********99665555599*********************655.55556666 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MSEREDNSGL LDHLLEKNEI YDNFQDNAEN SSTGFLQTKD SKGESPVAHC VMGTAWVYRD 60 ENGKQIFEKQ LTEDDITSDH LQIPKRMANY IQSLELQRAD PGEKYWEMDL QLDNWGDREC 120 QFTGQWKEFV NENKLKAKDL VVIEIFNNEK RLKIGCSSDQ KAINLNNPVF LRRLSRADVK 180 GLYVKKLREQ YSYDGNTGLI EIEPVIEMKL CSDIVYRYGG TNGVMFIQLP KKEVDKKMGR 240 DLSLPAVGGE IALPLFDPVG NNVVEMKLVH TEKDEYHVGG EWEIYAAKYD LLMSDTIFLD 300 KVTVHRDHDH DHDHELNNPT TAKFSYHYEI TYQRRRGTSD QSSLAAAAAT VLDNNIKDNG 360 VNSCIML

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MSEREDNSGL LDHLLEKNEI YDNFQDNAEN SSTGFLQTKD SKGESPVAHC VMGTAWVYRD  60
ENGKQIFEKQ LTEDDITSDH LQIPKRMANY IQSLELQRAD PGEKYWEMDL QLDNWGDREC  120
QFTGQWKEFV NENKLKAKDL VVIEIFNNEK RLKIGCSSDQ KAINLNNPVF LRRLSRADVK  180
GLYVKKLREQ YSYDGNTGLI EIEPVIEMKL CSDIVYRYGG TNGVMFIQLP KKEVDKKMGR  240
DLSLPAVGGE IALPLFDPVG NNVVEMKLVH TEKDEYHVGG EWEIYAAKYD LLMSDTIFLD  300
KVTVHRDHDH DHDHELNNPT TAKFSYHYEI TYQRRRGTSD QSSLAAAAAT VLDNNIKDNG  360
VNSCIML

Link Out ? help Back to Top
Ensembl	OIT05938