PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05866 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 26964.7 Da PI: 8.1477 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.4 | 1.5e-14 | 66 | 112 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+E+rRRdriN +++Lr+l+P + +K++Ka+ L+ +ve++k+L OIT05866 66 RSHSEAEKRRRDRINAQLSTLRKLIPRS-----EKMDKAALLRSVVEHVKDL 112 78************************98.....8****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MMENSSCSEY WPEAETETHF QQVGAASPFL FPLVPNSCDD TSFQLYEKPC YWSQQFEEDT 60 SASASRSHSE AEKRRRDRIN AQLSTLRKLI PRSEKMDKAA LLRSVVEHVK DLKGRAKEIS 120 KVLNTPTDID QVIIEHLDEE QNSSNSIILK VCVCCDDRPE LFSELNRALK NLKLTTVEAN 180 ITSLGGRIKC VFMLKSVNGV CLNSLKHSLS RIAISPCTSN YRIKSKRQRF FLPPNFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 224 | 229 | KSKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 4e-37 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05866 |