PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05797

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 345aa MW: 38574.5 Da PI: 5.4209

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05797	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	273	307	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ OIT05797 273 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 307 569*****************************885 PP
2	ELK	41.2	3.5e-14	227	248	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ OIT05797 227 ELKGQLLRKYSGYLGSLKQEFM 248 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MEGGGSSGNT SCLMGYGDDN NNNNNGNAAL CPPPMMMMMM PPPQPITNNN AESSNNIGGN 60 NHNNILFLPF LDNNNNNPHE DANCSSSTSI KSKIMAHPHY PRLLSAYVNC QKIGAPPEVV 120 ARLEEVCATS ATIGRNSGGI VGEDPALDQF MEAYCEMLTK YEQELSKPFK EAMVFLSRIE 180 CQFKALTLAS SSESVAALGE AIDRNGSSEE EVDVNNGFID PQAEDQELKG QLLRKYSGYL 240 GSLKQEFMKK RKKGKLPKEA RQQLLDWWTR HYKWPYPSES QKLALAESTG LDQKQINNWF 300 INQRKRHWKP SEDMQFVVMD AAHPHYYMDN VLGNPFPMDI TPTLL

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MEGGGSSGNT SCLMGYGDDN NNNNNGNAAL CPPPMMMMMM PPPQPITNNN AESSNNIGGN  60
NHNNILFLPF LDNNNNNPHE DANCSSSTSI KSKIMAHPHY PRLLSAYVNC QKIGAPPEVV  120
ARLEEVCATS ATIGRNSGGI VGEDPALDQF MEAYCEMLTK YEQELSKPFK EAMVFLSRIE  180
CQFKALTLAS SSESVAALGE AIDRNGSSEE EVDVNNGFID PQAEDQELKG QLLRKYSGYL  240
GSLKQEFMKK RKKGKLPKEA RQQLLDWWTR HYKWPYPSES QKLALAESTG LDQKQINNWF  300
INQRKRHWKP SEDMQFVVMD AAHPHYYMDN VLGNPFPMDI TPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	252	LKQEFMKKRK
2	249	253	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-140	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT05797