PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05653 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HSF | ||||||||
Protein Properties | Length: 387aa MW: 44164.4 Da PI: 4.6902 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 99.8 | 2.6e-31 | 80 | 172 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 F+ k+ye+l d +++ lisw+ ng+sf+++d ++fa +vLp++F+h+n++SFv QLn YgF+k++ ++ eF+h+ F++gk + l++ik OIT05653 80 FVLKIYEMLADIQFNPLISWNGNGTSFIIHDCHKFAAEVLPRFFRHNNISSFVCQLNCYGFRKISWDK---------FEFQHECFQRGKGQWLKNIK 167 9*****************************************************************99.........67****************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 rk s+ OIT05653 168 RKGSK 172 *9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MKSDKGKGKM TNNIGELLEE WYEDEGLEDV QIDISMLEND DCQGDNTNNE GIHGSATDAH 60 HHGLGVRNSR RNLQKRACPF VLKIYEMLAD IQFNPLISWN GNGTSFIIHD CHKFAAEVLP 120 RFFRHNNISS FVCQLNCYGF RKISWDKFEF QHECFQRGKG QWLKNIKRKG SKKSEMNQQP 180 QEQGIDETVA VTMEKEIEEI REEQNAMREE IIMLHQQLDI LEKEMEDNTK QARNHVSSKK 240 AKILEYLLGP LFECIGELGS SEVAQELEEE EKQGDDIEDG VENRGEKRKK QVGEELQGKN 300 EGSKKIAAAG VSDFKSDSDL RKMLMDEMDM NNLAQEQPDN FLESAEQAEG PSFWIDYVEK 360 LDHKPILSGV GPSGKPNFQA ISCILST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 5e-29 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05653 |