PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05648

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 461aa MW: 50732.6 Da PI: 6.925

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05648	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	5.1e-39	105	164	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s OIT05648 105 PDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGSGRRKNKSS 164 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MSQVKLFGKT IRLPLDDLLD QRNSSATTTS HDDLITSEAE LTQIKNRDDF TNSTADEAVE 60 PATSSGISDD PKTEDANKET SSPKATKKED LSEANVTQEK ALKKPDKILP CPRCNSMETK 120 FCYYNNYNVN QPRHFCKKCQ RYWTAGGTMR NVPVGSGRRK NKSSPTTGYR HIMVSDALQA 180 ARFEAAHGMN LPMLRENGTV LAFGSDKPLC DSMASILNLA EKSQNTVQNG FNGSEQRKPS 240 ACGGKEIGND ISSGACSTAS NSTHDLTWKN FQAFPPQVHH FPGHPWPYSY NAAPWTSAVP 300 QPNLAPPRFP VPFTPAPPYW GCTVASPWNV PWVSPLFPSP DCSVLSATPT SPTLGKHSRD 360 ECMLNPSNLE KEDPLHDLDG ERCVLVPKTL RVDDPDEAAK SSIWSTLDIK NEKNDSTNGA 420 RLFKAFNSKV DDQRKHESDA SLVLQANPAA LSRSFTFHES T

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MSQVKLFGKT IRLPLDDLLD QRNSSATTTS HDDLITSEAE LTQIKNRDDF TNSTADEAVE  60
PATSSGISDD PKTEDANKET SSPKATKKED LSEANVTQEK ALKKPDKILP CPRCNSMETK  120
FCYYNNYNVN QPRHFCKKCQ RYWTAGGTMR NVPVGSGRRK NKSSPTTGYR HIMVSDALQA  180
ARFEAAHGMN LPMLRENGTV LAFGSDKPLC DSMASILNLA EKSQNTVQNG FNGSEQRKPS  240
ACGGKEIGND ISSGACSTAS NSTHDLTWKN FQAFPPQVHH FPGHPWPYSY NAAPWTSAVP  300
QPNLAPPRFP VPFTPAPPYW GCTVASPWNV PWVSPLFPSP DCSVLSATPT SPTLGKHSRD  360
ECMLNPSNLE KEDPLHDLDG ERCVLVPKTL RVDDPDEAAK SSIWSTLDIK NEKNDSTNGA  420
RLFKAFNSKV DDQRKHESDA SLVLQANPAA LSRSFTFHES T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-89	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT05648