PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05448
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 331aa    MW: 36922.1 Da    PI: 4.787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05448genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-194393155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++ 
  OIT05448 43 CRYLGVRRRP-WGRYAAEIRDPNT---KERHWLGTFDTAEEAALAYDRAARSMRS 93
              6899******.**********933...5************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MNIIKSSTSS STNKSTKPRK NVGSNVCNIQ SGKQNAEEQQ NNCRYLGVRR RPWGRYAAEI  60
RDPNTKERHW LGTFDTAEEA ALAYDRAARS MRSNNNKSNK PIRTNFVYSD MPHGSSVTCM  120
ISPDEEYHHQ FQLHQQQQQL LVFGEAENVS VPAVDYADFS QFSISSTNNG GGGGGEFPLQ  180
QYYNPNYNVH VEESYRYDSN KATSTELPPL PEDITSSGNF YYYSEESNHQ TTQFPATTAI  240
SPVSDMAYSS SSTTSLFNEM IMPMSFGTNN EYQYGVTCGG VGGSTITTAS CTTSESYNGF  300
GFDDCLQPLQ YCSSNVMQDE SNNTTLSYWF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-27ERF family protein