PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05447
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 333aa    MW: 37137.3 Da    PI: 4.7801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05447genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-194393155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++ 
  OIT05447 43 CRYLGVRRRP-WGRYAAEIRDPNT---KERHWLGTFDTAEEAALAYDRAARSMRS 93
              6899******.**********933...5************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNIIKSSTSS TTNKSTKPRK NTGSNVSSTQ SGKQNAEEQQ NNCRYLGVRR RPWGRYAAEI  60
RDPNTKERHW LGTFDTAEEA ALAYDRAARS MRSNNNKSNK PIRTNFVYSD MPHGSSVTCM  120
ISPDEEYHHH LQQHQQQQQL LVFGQTENVP VPTVNYADFS HFSISNMNIS NGGGGGGEDF  180
ALQQYYNSNY NMHMEDDYRY DSNKATSTDL PPLPEDITSS GNCYYFSEES DQTTQFPATT  240
AISSVSDMGY SSNSTSLLNE MIMPMSFGTN NEYQYGMTCG ELGGGSTITT TSSTTTGSYN  300
GFGFDDCLQP LQYCSSNIMQ DESNNTTLGY WFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.14e-28ERF family protein