PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05381 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YA | ||||||||
Protein Properties | Length: 257aa MW: 28806.2 Da PI: 9.2685 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 93.5 | 2.6e-29 | 101 | 157 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+ e+k+ ksrkpylheSRh+hA+rR+R gGrF OIT05381 101 EEPMYVNAKQYHGILRRRQLRAKAVLEQKV-VKSRKPYLHESRHRHAMRRARDGGGRF 157 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGADTYGEVE RTIYQRSAYS DYKREGKHAE FMPPIMGENL RAANQFEQMA PSIAFKSYPY 60 SEVPQYSGGN VAAACGESTV HQNIERSVHN GRMIMPLEVT EEPMYVNAKQ YHGILRRRQL 120 RAKAVLEQKV VKSRKPYLHE SRHRHAMRRA RDGGGRFLNT KKKIQLPANN NINATTPSSK 180 GKGCAASEVS SMDSDFSQNY LLSSGHIGSS NATSVEGFQF QGIHNTENPQ LGCHYQWNLN 240 DNHCNCMQSG ASNLQPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 151 | RHRHAMRRAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 4e-30 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05381 |