PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05330
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 417aa    MW: 46821.9 Da    PI: 4.8261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05330genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.35e-15106151352
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                kGVr +k +g+++AeIrdps+    kr++lg+f+t + Aa+a+ a + +
  OIT05330 106 PKGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFDTVKAAAEAYNAKKAE 151
               79****99.**********964...3**********99999999887655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MPCLPQELFD MMSNKERVND GCIGLPRKVR IIYDDPDATE SEGENDHNTC NVVRIKRVVK  60
EVNISSAYLE KDFEKCLVKS SKKSLENKNK SGLENKKVQI KSSSLPKGVR MRKWGKYAAE  120
IRDPSQGKRI WLGTFDTVKA AAEAYNAKKA EFDRRILSER GKNLSSPRAP PECSTACSSH  180
PTNRTSSLYS HPSPSSVLDV PTSSAATAVE CIDIPMKDKN PVPVLEVEQP ASEIVEKQLL  240
WPPSGCQDFN PRFEDQMLYE DPLIEQGTIS DILVEMTEFN TMKKTKARQP TIEICQKSTK  300
GIEDRRVNCT EQSITSPSIS AELNMMNFEE TAVSGNNLKH LGFDENALFG KDFTQTFDPY  360
TDFIGLDSNF LCCDGIEEFV YGVNEDFRDN VAAKSPKLDE VDLKWLDEVL VQDQSVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-15ERF family protein