PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05142
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 267aa    MW: 30497.6 Da    PI: 6.5939
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05142genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.32.6e-22174232259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+++WrKYG K   +s+f +sYYrC    +Cp++++v++s++d + v++tY+g+H h+
  OIT05142 174 ADQWRWRKYGMKRTGSSPFLKSYYRCNEVeNCPARRHVQQSSTDANKVVVTYRGQHIHH 232
               59************************9988***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MKPSPRRKFS MDENDWDLWA IVRSCYNVNR AIPDDDVRSC NNVNTTALID HCVDQDGNSA  60
ANTNTPTLFP EQSDWFGDFS DSFPTENEHC FGLDEVCCLS KNANTNYTIE PHNPENKTET  120
IPNSPLVVEH EEKKKNKKVR GSMQLSRTEE GKAFSYRGKS TERYEILAEK LSEADQWRWR  180
KYGMKRTGSS PFLKSYYRCN EVENCPARRH VQQSSTDANK VVVTYRGQHI HHPPPNQHIA  240
MVDTSQNANA PVQDPSFPSS TSTSLFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.19e-14WRKY family protein