PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05055 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 292aa MW: 33041.4 Da PI: 8.3731 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 5e-19 | 109 | 159 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge OIT05055 109 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 159 59******9.**********954...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MNRIQENNTT MSCIFDEGAQ IRSSLSQLLL TSGTNTLDSI FSHCQETNQM TSPVFEPLGS 60 SVYLRQRDLL QKFCQENITN ISIPTTSTTF PLHNSLYTQS YRFPEKKKLY RGVRQRHWGK 120 WVAEIRLPQN RMRVWLGTYD TAEAAAYAYD RAAYKLRGEY ARLNFPNIRD PSKLGLGDSE 180 KMNAVKNAVD AKIQAICQKV KREKAKKGAK KKCENESKVK ETIDSSSSTS SLVGDVISPS 240 VSEDGLWKSE NSNCSIFGDC LKEPLMESEF DSCSLARMPS FDPELIWEVL AN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 2e-53 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05055 |