PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05052
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ARR-B
Protein Properties Length: 839aa    MW: 91649.1 Da    PI: 6.2542
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05052genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.41.5e-23219272155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k++l+Wt  LH++F++a++++ G +kA P+tile+m+v+gLt+e+v+SHLQkYR+
  OIT05052 219 KTKLVWTDALHNKFLQAIKEI-GLDKAYPRTILEVMDVPGLTRENVASHLQKYRI 272
               689******************.********************************6 PP

2Myb_DNA-binding29.81.4e-09221271148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      ++ WT  ++ ++++a+k+ G +   ++tI + m   g+t++++ s++qky+
         OIT05052 221 KLVWTDALHNKFLQAIKEIGLDkaYPRTILEVMDvPGLTRENVASHLQKYR 271
                      679***********************************************7 PP

3Response_reg79.89.3e-27251331109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +++vdD+ + +++++  l+k +y +v +++++++al +l+ +   +D+i+ D+ mp+m+G+el + i++e  ++p+++++a + ++++le l++Ga 
      OIT05052  25 IMVVDDDITCLSIIAAQLKKWKY-QVVTVKHARDALCILRFSGvsFDVIVSDVHMPDMNGFELQRVIAQEF-DVPVVFMSADDRDSMVLEGLERGAV 119
                   89*********************.9999************99999**********************9999.9************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                    fl Kp++p++l++
      OIT05052 120 FFLLKPISPDDLRD 133
                   ************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MGGEMVVANK SSEILDSEFY KSYSIMVVDD DITCLSIIAA QLKKWKYQVV TVKHARDALC  60
ILRFSGVSFD VIVSDVHMPD MNGFELQRVI AQEFDVPVVF MSADDRDSMV LEGLERGAVF  120
FLLKPISPDD LRDIWQYAAL AKKNKGKGKS VVIEEIQENY SSSKSSSGLP KSPHENVESS  180
SSINVKKGNK EGKKEESKKK SARKYKEAEK EDSGTPPKKT KLVWTDALHN KFLQAIKEIG  240
LDKAYPRTIL EVMDVPGLTR ENVASHLQKY RIFLRKVTEE SFRVQAADTN LTNSATQSTF  300
GSKGLSTISQ HPQEISGSQQ PFLKNNSLAE TSNRSSSSLS NRRATPAITL PGYGKAKLVL  360
NKGDSSKITS SNANQVSTVE AVKNQTRSLI HEDVSTQLLN AAILANQRIT RNLNSLHNSS  420
AAGEHHESNQ SLVQRDSSLI GFQRDKEFAA MLTSYLNQGA NRTQLTRLPN NVETGGGSGT  480
VLDQDWSSYF NQGANRLQLT RLPNFSETRE GSGTKPGQDC EGEKQSAAMW SSYIDQGANR  540
VQLTRLPNNF ETGGGSGTKP GQDCEGEKQS ATMWSSYFNQ GANHMQLNRL PNNAETGGGS  600
GTKPGQDCEG EKRSAVVWSS NLNQGANHVQ LTRFPDNFEA GGGSGTNPGQ DCEGEKQSAA  660
MWSSYFNQGA NSVQLTRFPN NFEAGGGSGT KPGQDGEGEK QSAAMWSSYL NQGANCVNQG  720
EKQSEVVMWS SNLQLTQFPN NVETRGGSGT KLGQDYDVSM FDKNNATSYS SGIGDLTSTF  780
YSQLNVQPFH VQGDHPGVTA EEGSSSQLHH THQNPELEHG DDTDFWDSLL SLSPYNGDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.19e-51ARR-B family protein