PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT05052 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ARR-B | ||||||||
Protein Properties | Length: 839aa MW: 91649.1 Da PI: 6.2542 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 74.4 | 1.5e-23 | 219 | 272 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++l+Wt LH++F++a++++ G +kA P+tile+m+v+gLt+e+v+SHLQkYR+ OIT05052 219 KTKLVWTDALHNKFLQAIKEI-GLDKAYPRTILEVMDVPGLTRENVASHLQKYRI 272 689******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 29.8 | 1.4e-09 | 221 | 271 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT ++ ++++a+k+ G + ++tI + m g+t++++ s++qky+ OIT05052 221 KLVWTDALHNKFLQAIKEIGLDkaYPRTILEVMDvPGLTRENVASHLQKYR 271 679***********************************************7 PP | |||||||
3 | Response_reg | 79.8 | 9.3e-27 | 25 | 133 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +++vdD+ + +++++ l+k +y +v +++++++al +l+ + +D+i+ D+ mp+m+G+el + i++e ++p+++++a + ++++le l++Ga OIT05052 25 IMVVDDDITCLSIIAAQLKKWKY-QVVTVKHARDALCILRFSGvsFDVIVSDVHMPDMNGFELQRVIAQEF-DVPVVFMSADDRDSMVLEGLERGAV 119 89*********************.9999************99999**********************9999.9************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 fl Kp++p++l++ OIT05052 120 FFLLKPISPDDLRD 133 ************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 839 aa Download sequence |
MGGEMVVANK SSEILDSEFY KSYSIMVVDD DITCLSIIAA QLKKWKYQVV TVKHARDALC 60 ILRFSGVSFD VIVSDVHMPD MNGFELQRVI AQEFDVPVVF MSADDRDSMV LEGLERGAVF 120 FLLKPISPDD LRDIWQYAAL AKKNKGKGKS VVIEEIQENY SSSKSSSGLP KSPHENVESS 180 SSINVKKGNK EGKKEESKKK SARKYKEAEK EDSGTPPKKT KLVWTDALHN KFLQAIKEIG 240 LDKAYPRTIL EVMDVPGLTR ENVASHLQKY RIFLRKVTEE SFRVQAADTN LTNSATQSTF 300 GSKGLSTISQ HPQEISGSQQ PFLKNNSLAE TSNRSSSSLS NRRATPAITL PGYGKAKLVL 360 NKGDSSKITS SNANQVSTVE AVKNQTRSLI HEDVSTQLLN AAILANQRIT RNLNSLHNSS 420 AAGEHHESNQ SLVQRDSSLI GFQRDKEFAA MLTSYLNQGA NRTQLTRLPN NVETGGGSGT 480 VLDQDWSSYF NQGANRLQLT RLPNFSETRE GSGTKPGQDC EGEKQSAAMW SSYIDQGANR 540 VQLTRLPNNF ETGGGSGTKP GQDCEGEKQS ATMWSSYFNQ GANHMQLNRL PNNAETGGGS 600 GTKPGQDCEG EKRSAVVWSS NLNQGANHVQ LTRFPDNFEA GGGSGTNPGQ DCEGEKQSAA 660 MWSSYFNQGA NSVQLTRFPN NFEAGGGSGT KPGQDGEGEK QSAAMWSSYL NQGANCVNQG 720 EKQSEVVMWS SNLQLTQFPN NVETRGGSGT KLGQDYDVSM FDKNNATSYS SGIGDLTSTF 780 YSQLNVQPFH VQGDHPGVTA EEGSSSQLHH THQNPELEHG DDTDFWDSLL SLSPYNGDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 9e-51 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT05052 |