PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04989

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 323aa MW: 36165.2 Da PI: 4.7637

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04989	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.5	2.2e-08	269	302	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ e+ LA+++gL+ +q+ +WF N+R ++ OIT04989 269 WPYPTEGEKVCLAESTGLDPKQINNWFINQRKRH 302 58*****************************885 PP
2	ELK	40.2	7.1e-14	222	243	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K+ L+rKYsgy++sLkqEF+ OIT04989 222 EIKDKLMRKYSGYISSLKQEFC 243 89*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEEMYEFGSS SSTGYSVNDH LQPPYFGSPA AFCDGVVPME FGSGNMSWAS SEISAANSVV 60 DKSGTSSSNL QEHHHDMNIR AKISSHPLYP KLLRTCIDCH KVGAPSEIVS MLDNINIVQE 120 DDLYSSPLNR LSNDSELDDF MGTYCDVLAK FKSDLEKPFN EATTFLNNIE IQLSNLCTAP 180 ATTSNNISDE GAAGLEEEEE AAAADTSGGG GNTNDMCRSE NEIKDKLMRK YSGYISSLKQ 240 EFCKKNKKGK LPREARQILL NWWTTHYKWP YPTEGEKVCL AESTGLDPKQ INNWFINQRK 300 RHWKPSENMQ YAVMENLYGH FSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	3e-87	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT04989