PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04693
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 355aa    MW: 39288.7 Da    PI: 6.7166
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04693genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.6e-192475156
       AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
              +++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  OIT04693 24 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 75
              6799******.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MKLSAPQPNE NIRTRRKPSS RGHPRFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED  60
AARAYDQAAR TLRGANARTN FELPESDSHR GTNFENVEPF NFEEACRTEE PENGLVGALK  120
AKLFNSKSSR SFIQAYASNS TTKAAIKPSV HSFENKKTLS QTGQAVTLEA EKLPKQDITH  180
NIGQGKNYCD TLFQGNHNLN YISLMSSDHQ PVISSQLWQN NQCNSGTNSA IMWANEQGRL  240
PWGEPQMSRG HDEVLFSTTN NNNINTNIFG GGNSTTCTWP MSVSVLGTSE PTVDLSTFGE  300
VDYLNAPVMM PHMNNGLTQA ASVPTEQQMI QFENGLWCAG ESVAWDPFLL SSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-18ERF family protein