PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04687
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family LBD
Protein Properties Length: 70aa    MW: 8098.24 Da    PI: 8.9075
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04687genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260101.95.8e-32170371
    DUF260  3 aaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearard 71
              aaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++ reda++sl+yeA+ r+rd
  OIT04687  1 AACKFLRRKCQPECVFAPYFPPDQPRKFANVHKIFGASNVTKLLNELQPHHqREDAVNSLAYEADTRLRD 70
              8**********************************************76655***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
AACKFLRRKC QPECVFAPYF PPDQPRKFAN VHKIFGASNV TKLLNELQPH HQREDAVNSL  60
AYEADTRLRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.31e-42LBD family protein