PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04641
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 89aa    MW: 9844.89 Da    PI: 9.1467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04641genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.8e-111054244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT+e  + + +a + + ++   +W+ +ar +g g+t++++k ++
         OIT04641 10 GSWTAEQNKAFEKALAVYDKDtphRWSNVARAVG-GKTAEEVKRHY 54
                     89********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MASSSMSCHG SWTAEQNKAF EKALAVYDKD TPHRWSNVAR AVGGKTAEEV KRHYEILVQD  60
VMSIENGRVP FPNYRTTNGG RTNTNTAGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-35MYB_related family protein