PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04320
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 371aa    MW: 41235.3 Da    PI: 4.5247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04320genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.5e-18105154255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+G+r+++ +g+W+AeIrdp++     r++lg+f +aeeAa+a++  +++++g
  OIT04320 105 QYRGIRQRP-WGKWAAEIRDPTK---GIRVWLGTFNSAEEAARAYDVEARRIRG 154
               69*******.**********964...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MCGGAILSDL VPPSRTSRRL TADLLWGTSD LSKKKKNYSN YHSKPLRSKI FDLDDEFEAD  60
FQDFKDYADD VDELKAFAFH GSKSVKSDDS SCDADKSSKR KRKNQYRGIR QRPWGKWAAE  120
IRDPTKGIRV WLGTFNSAEE AARAYDVEAR RIRGKKAKVN FPDEAPVSSS RRVAKLNPQE  180
ALHEESSNIV QANTPFINNL GCGSDDSLSF VEEKPTTKQY GYEDMSFTAG DMGLGSFSPS  240
AGTNVYFNSD EGSNTFDCSD FGWGEPCSRS PEISSVLSAV LESNGTQFDE DDRPENKLKS  300
CSDNSLPDDG NTVNKLSEEL SAFESQMKFL QIPYLEGNWD ASVEALLNAD ATQYGGNAMD  360
LWSFDDVPSL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.36e-56ERF family protein