PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04263
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 275aa    MW: 30846.6 Da    PI: 8.4757
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04263genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-20141189355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               y+GVr+++ +g+W+AeIrdp+    + +r++lg+f t+eeAa+a+++a+ +++g
  OIT04263 141 YRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFLTEEEAARAYDRAAIEFRG 189
               9*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MQWSTNIRVK QEATHDNHRR HLPPPGLTAE EEFSVMVAAL KNVITGNTTA IHANSELNSF  60
GCFQNVISTP SFSSSPSTSM SSFEPPLLRV IDEPEPCKFC GIKGCLGCDY FGATTTTDNK  120
NNNNKKTKKI SVVKKKKKNN YRGVRQRPWG KWAAEIRDPR KAARVWLGTF LTEEEAARAY  180
DRAAIEFRGP RAKLNFSFSD YTLIQEQSTP FSSPQNQQPE SQFEQGNADV KMGMSKLDND  240
FWDQLMGDND IQRWLTIMDF SGGSSDFAGA NVLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-26ERF family protein