PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT04186 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WOX | ||||||||
Protein Properties | Length: 235aa MW: 26895.3 Da PI: 9.5535 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.4 | 3.9e-21 | 96 | 155 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++ +l +++ ++V++WFqN++a+e++ OIT04186 96 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITVQLgkygKIEGKNVFYWFQNHKARERQ 155 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 117.1 | 8e-38 | 96 | 157 | 4 | 65 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++it +L +yGkie+kNVfyWFQN+kaRerqkq OIT04186 96 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQ 157 8***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MYMGSSSGSL SMKVHQFTRG LILEHDSATP SLTLGCKRLR PLAPKLSTCT NDPTIVTPPF 60 DLKSFIRPES STSPRKTSFN DDKKDSSQVE SHPGGTRWNP TQEQIGILEM LYRGGMRTPN 120 AQQIEQITVQ LGKYGKIEGK NVFYWFQNHK ARERQKQKRN SLGLSQSPRT PPAIVTSPLS 180 FDTRGEVVRE EDSPYKRKCR GWTYEYLEEE EKRNCREDNG DRTLELFPLH PEGMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46480.1 | 9e-78 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT04186 |