PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT04138 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 234aa MW: 26889.1 Da PI: 10.2212 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.4 | 3e-19 | 133 | 219 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ps+v+ +l lp +f++++ ++++ t+tl de+g++W + +k++ l++GWk+F+ +++L +gD +vF+l++ ++f +v ++r OIT04138 133 SMLPSHVSGGFWLGLPSNFCRKNL--PRRDDTITLIDETGEEWPTVYLAQKNG----LSGGWKKFAVDHDLADGDAIVFHLIRPTKF--KVYIIR 219 689*****************9995..346679***************555555....9************************97777..888877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MVMSKVKYEK LRQQRLEENK KRMEELNLPL LTQALKISSS PKPSPMKKVK PRIIRTELVS 60 VRRSPRVANK PAPEYKEVIY YERVMIPRRM STPRKRDSLN MVYATDEERA ASIEKAEKLE 120 ASLGPDYPIL VRSMLPSHVS GGFWLGLPSN FCRKNLPRRD DTITLIDETG EEWPTVYLAQ 180 KNGLSGGWKK FAVDHDLADG DAIVFHLIRP TKFKVYIIRV NNVSESESTE TSTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 7e-65 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT04138 |