PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04105

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 534aa MW: 59544.9 Da PI: 8.3918

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04105	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56	7.2e-18	18	98	12	98
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 s l +p kf+++++g s t l +sg+sW + l +++++ ++ +GW +Fvk++ L+ gD +vF++dg+ f v +f+ OIT04105 18 HSETLKIPSKFVKHMEGR--ASGTAFLVGPSGNSWPMDL--IQQDDGLFFHNGWGSFVKDHCLENGDALVFRYDGDLHF--SVLAFD 98 56679*****777777..4459***********..99999*************************997655..676666 PP
2	B3	57.5	2.4e-18	232	326	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f kv+++ +v+ s l +p +fa+eh +++++++ l +++g++W+v+ i ++ + ++++ +GW +Fv++n+++ gD+++F+l+++ e l+v+v+r OIT04105 232 FTKVMKRFNVSGSYTLNIPYQFATEHL--PKCKVKILLHNLKGKTWTVNSIPtTRVQTSHTFCGGWLSFVRDNNIDLGDICIFELVRKCE--LRVHVLR 326 889999999***************6..34999************77566666699*********************998554..5888877 PP
3	B3	48.4	1.7e-15	426	508	12	97
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 s l +p +f eh +++ ++++l++++g+ W+v+ i + k ++ +++ +GW+ Fv++n+++ gD+++F+l+g + e++v+++ OIT04105 426 GSYTLKVPYQFSMEHL--PNCRTEIVLRNLRGECWTVNSIPTMKVQTlHTFCGGWSAFVRDNDIQMGDICIFELVG--KYEMRVHIC 508 5567899**99996..45889************8888887789999*******************998..566688887 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MWDVKRPHFL VGFNPSIHSE TLKIPSKFVK HMEGRASGTA FLVGPSGNSW PMDLIQQDDG 60 LFFHNGWGSF VKDHCLENGD ALVFRYDGDL HFSVLAFDES SCEKEAAYNA DCSQGATNLY 120 NLALTKRDRG NSALLECVVE GVPKKMRSTQ IPSECTACSN GRIYASSFLN EMENAGNAST 180 NTVTIAVPSQ TEIVCSNSEV KTGNGTSEEP MWLTAQEAEK VARSFTSSFP NFTKVMKRFN 240 VSGSYTLNIP YQFATEHLPK CKVKILLHNL KGKTWTVNSI PTTRVQTSHT FCGGWLSFVR 300 DNNIDLGDIC IFELVRKCEL RVHVLRVEKE GNDYSSKVAK AKTYDKKGSA HGKEKHGNML 360 KSHQLLLSKI SSGDSVIRIP AQDKQGSFTK SCMSMKSVPE EKLAAESFNS NFPHFVRIMK 420 KFNISGSYTL KVPYQFSMEH LPNCRTEIVL RNLRGECWTV NSIPTMKVQT LHTFCGGWSA 480 FVRDNDIQMG DICIFELVGK YEMRVHICAI GKKGLDYRNG ITSNESAILA SLTS

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MWDVKRPHFL VGFNPSIHSE TLKIPSKFVK HMEGRASGTA FLVGPSGNSW PMDLIQQDDG  60
LFFHNGWGSF VKDHCLENGD ALVFRYDGDL HFSVLAFDES SCEKEAAYNA DCSQGATNLY  120
NLALTKRDRG NSALLECVVE GVPKKMRSTQ IPSECTACSN GRIYASSFLN EMENAGNAST  180
NTVTIAVPSQ TEIVCSNSEV KTGNGTSEEP MWLTAQEAEK VARSFTSSFP NFTKVMKRFN  240
VSGSYTLNIP YQFATEHLPK CKVKILLHNL KGKTWTVNSI PTTRVQTSHT FCGGWLSFVR  300
DNNIDLGDIC IFELVRKCEL RVHVLRVEKE GNDYSSKVAK AKTYDKKGSA HGKEKHGNML  360
KSHQLLLSKI SSGDSVIRIP AQDKQGSFTK SCMSMKSVPE EKLAAESFNS NFPHFVRIMK  420
KFNISGSYTL KVPYQFSMEH LPNCRTEIVL RNLRGECWTV NSIPTMKVQT LHTFCGGWSA  480
FVRDNDIQMG DICIFELVGK YEMRVHICAI GKKGLDYRNG ITSNESAILA SLTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	5e-23	B3 family protein

Link Out ? help Back to Top
Ensembl	OIT04105