PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT04023 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 10329.8 Da PI: 9.9038 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.6 | 1.9e-10 | 3 | 47 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WTt +++ +a +++ ++ +W+ Iar++g g+++++++ ++ OIT04023 3 SWTTRQNKKFEEALALFDKEtpdRWHNIARCVG-GKSAEEVRRHYE 47 6*****************99*************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MASWTTRQNK KFEEALALFD KETPDRWHNI ARCVGGKSAE EVRRHYELLV KDIMQIENGQ 60 VPLPNYKAVG SNSRGYANEQ RLLKNLKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 2e-38 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT04023 |