PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03991 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 327aa MW: 36592.5 Da PI: 10.1206 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 377.7 | 2e-115 | 1 | 327 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye...pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslas 93 mdd+g+r+ r+k+ + + ++ +s+k q+m+++aerda+i+ernlalsekkaa+aerdma lqrd+a+aern+a++erdn++++l+++e s++ OIT03991 1 MDDSGHRDngRHKPpQGQwlmQHqPSMK-----QIMAIMAERDAAIQERNLALSEKKAALAERDMAILQRDSAIAERNNAIMERDNAIATLQYRESSISG 95 999*998888888732222232234444.....************************************************************9999776 PP GAGA_bind 94 alpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader..... 186 + +v+++ ++ +++ + + + p++++++++ r+++ +e++p++ a+e ++ +++k rak+pk+ + +kk+ k kkvk+e++d + OIT03991 96 GGQIARGVVKHMHHPQQHVHvH-HqPHMGEPTYNPRDMHVNESMPVSPVAPEPTKPRRNK---RAKEPKAMTGSKKTPKA---SKKVKRETEDLNqttfg 188 6555556665555544443324.359*******************998777666655555...55555554444333322...23333333331123456 PP GAGA_bind 187 ........................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSq 262 sk ++k++dl+ln+v++De+t+PvPvCsCtG+lr CYkWGnGGWqS+CCtt++S+yPLP+++++r+aRi+grKmS+ OIT03991 189 ksqewkgaqemgdasddlnrqlavSKPDWKDQDLGLNQVAFDETTMPVPVCSCTGVLRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARIGGRKMSG 288 6678999********************************************************************************************* PP GAGA_bind 263 gafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +af+klL++LaaeG+dlsnpvDLk+hWAkHGtn+++ti+ OIT03991 289 SAFTKLLSRLAAEGHDLSNPVDLKNHWAKHGTNRYITIK 327 **************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MDDSGHRDNG RHKPPQGQWL MQHQPSMKQI MAIMAERDAA IQERNLALSE KKAALAERDM 60 AILQRDSAIA ERNNAIMERD NAIATLQYRE SSISGGGQIA RGVVKHMHHP QQHVHVHHQP 120 HMGEPTYNPR DMHVNESMPV SPVAPEPTKP RRNKRAKEPK AMTGSKKTPK ASKKVKRETE 180 DLNQTTFGKS QEWKGAQEMG DASDDLNRQL AVSKPDWKDQ DLGLNQVAFD ETTMPVPVCS 240 CTGVLRPCYK WGNGGWQSSC CTTNLSMYPL PAVPNKRHAR IGGRKMSGSA FTKLLSRLAA 300 EGHDLSNPVD LKNHWAKHGT NRYITIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.1 | 1e-127 | BBR-BPC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03991 |