PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03969
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 279aa    MW: 31742.6 Da    PI: 5.0154
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03969genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-19137188155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++y+GVr+++ +g+++AeIrdp+     +r++lg+f ta eAa a+++a+ kl+g
  OIT03969 137 KKYRGVRQRP-WGKFAAEIRDPTRK--GTRVWLGTFETAIEAAMAYDRAAFKLRG 188
               59********.**********8542..4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDLDLIREHL LDDVAFMENY CSSSETSSTL YSQNSSVSES FDSLTSDLKM ETFSFDPTNF  60
AQNLNQEFNS FEFEPKPNLV TPTTISNSPK KTSFNERKPS LNITIPNVKK TEQPKTEEPK  120
TEELKTEEVK TEYSVQKKYR GVRQRPWGKF AAEIRDPTRK GTRVWLGTFE TAIEAAMAYD  180
RAAFKLRGSK AILNFPLEVS NFKQENNVIE QSVNLNLNLN SSGKRAREVV NEDEVVVKKE  240
VKREQMVTPL TPSNWSSIWD CGDGKGIFEV PPLSPFLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61600.17e-41ERF family protein