PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT03946

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 903aa MW: 101044 Da PI: 6.0466

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03946	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.3	1.7e-29	582	633	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+le l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ OIT03946 582 AEKTITLEILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 633 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MDESVIPSNP LLTNQSDYFM DLDYMDGLLL EGCWLETTDG NEFLQNSPAT FNAPFDSSFM 60 WPNTIDTNNV EFNGIPSKDS QQEKQIQPFG ENVNNAMCTS GQSESHFVEA PELNRRWWFG 120 PKASSSVMDR LIWALGHIRD CSRDKDILLQ LWVPINRDGR HVLSTTDQPF LLDLNCPRLA 180 NYRQVSVKYQ FPANEDSKEI VGLPGRVFAD KVPEWSPDVR FFRSEEYPRV EHAQQYDVRG 240 TLAVPVFEQG SRNCLGVIEV VMTTQKIKYR PELESVCEAL KAVNLRTSEV STTQNAKVCD 300 LSYQAALPEI LEVLKSACET HGLPLAQTWV PCVQQGKGGC RHSEENLIHC VSTEDSACYI 360 ADPHVRGFHE ACSEHHLLKG QGVVGRAFMT NQPCFSADLT SYSKTEYPLS HHAQMFGLQA 420 AVAIRLRSIS TGSCDFVLEF FLPSDCRNPE EHRKMLTSLS IIIQNVCRTL RVVTDKELQE 480 EAVSIGEAAN PSFIRSNKEH TETSQERTSW TSCDAEFQES STVVSAFQDE KPDEMLRKEP 540 VEFRHHNDSG YGMDFALNEN HCASGEGVSR NGKKGDRRRT KAEKTITLEI LQQYFAGSLK 600 DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKI QRVIDSVQGA SGSLQIESFY 660 SNFPELASPN VSRLSPFADS KSNEHPKALN AQQEGCVMSP HAAASKSPSS SCSRSSSSSQ 720 CCSSGTKPQS SPLSIAGNDD PIVQEESVDN AVKRVKSEPE LHLSSEALKI LPRSQSHACV 780 AENPKSESLL VKKGPLRSQE EAPRVKVTHG EEKIRFRMQN NWRYSELLRE ITRRFGVDDP 840 SGLQLKYMDD DSEWVLLTCD ADLEECIDVC MSSQNQMIKL ILVRDSQHHI GSSFGSSSPI 900 LVQ

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MDESVIPSNP LLTNQSDYFM DLDYMDGLLL EGCWLETTDG NEFLQNSPAT FNAPFDSSFM  60
WPNTIDTNNV EFNGIPSKDS QQEKQIQPFG ENVNNAMCTS GQSESHFVEA PELNRRWWFG  120
PKASSSVMDR LIWALGHIRD CSRDKDILLQ LWVPINRDGR HVLSTTDQPF LLDLNCPRLA  180
NYRQVSVKYQ FPANEDSKEI VGLPGRVFAD KVPEWSPDVR FFRSEEYPRV EHAQQYDVRG  240
TLAVPVFEQG SRNCLGVIEV VMTTQKIKYR PELESVCEAL KAVNLRTSEV STTQNAKVCD  300
LSYQAALPEI LEVLKSACET HGLPLAQTWV PCVQQGKGGC RHSEENLIHC VSTEDSACYI  360
ADPHVRGFHE ACSEHHLLKG QGVVGRAFMT NQPCFSADLT SYSKTEYPLS HHAQMFGLQA  420
AVAIRLRSIS TGSCDFVLEF FLPSDCRNPE EHRKMLTSLS IIIQNVCRTL RVVTDKELQE  480
EAVSIGEAAN PSFIRSNKEH TETSQERTSW TSCDAEFQES STVVSAFQDE KPDEMLRKEP  540
VEFRHHNDSG YGMDFALNEN HCASGEGVSR NGKKGDRRRT KAEKTITLEI LQQYFAGSLK  600
DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKI QRVIDSVQGA SGSLQIESFY  660
SNFPELASPN VSRLSPFADS KSNEHPKALN AQQEGCVMSP HAAASKSPSS SCSRSSSSSQ  720
CCSSGTKPQS SPLSIAGNDD PIVQEESVDN AVKRVKSEPE LHLSSEALKI LPRSQSHACV  780
AENPKSESLL VKKGPLRSQE EAPRVKVTHG EEKIRFRMQN NWRYSELLRE ITRRFGVDDP  840
SGLQLKYMDD DSEWVLLTCD ADLEECIDVC MSSQNQMIKL ILVRDSQHHI GSSFGSSSPI  900
LVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIT03946