PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03782 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 275aa MW: 31853.8 Da PI: 4.7811 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 117 | 167 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd k +r++lg+f taeeAa a+++a+++++g OIT03782 117 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAAMAYDKAALRIRG 167 7********.**********3...2234*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MQYSLKMTRV EKNQQQEIAC EEILENVWAN FISKNNVANE KAQRETNELC PKKWEELPSL 60 ERLPSLGRWI SMGADTWEEF LNGILPPNDK IHSNDESTSK NEDVKVEKKK MVITTRHYRG 120 VRRRPWGKYA AEIRDSSRKG ARVWLGTFNT AEEAAMAYDK AALRIRGPKA YLNFPLETVA 180 QAMGLSFPEQ EWTFPSSVSQ IGGAYLGWDD QSISNSRKRV SRDWSMYEDL DVINQLPMEK 240 RIMRSWEEDL DQSDLEILEF EDLGSDYLDS LLSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 9e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03782 |