PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03754 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 21719 Da PI: 4.5246 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.4e-16 | 38 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++G+r++ +g+Wv+eIr+p++ ++r++lg+f t+e+Aa+a++ a+++l+g OIT03754 38 NFRGIRQR--NGKWVSEIREPRK---TTRIWLGTFSTPEMAAAAYDVAALALKG 86 589**975..6*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MADHFFNVTP SDNPPPSENF SPTGSASGNV LSPRRHPNFR GIRQRNGKWV SEIREPRKTT 60 RIWLGTFSTP EMAAAAYDVA ALALKGPDAP LNFPDSAYSY PVPASLSAVD IRAAAANAAA 120 ARAPPISESN SHEVLAYTGN YEGASTTVAA TFVDEEEIFG MPKLLDEMAE AMLVSPPRMH 180 QSTSYDESPE NSDADNLWSY P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 7e-47 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03754 |