PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03722
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 267aa    MW: 29246.4 Da    PI: 10.6366
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03722genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.33e-124791347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE+  ++ + ++lG+g+W+ I++    +Rt+ q+ s+ qky
         OIT03722 47 SWTEEEHRSFLIGLEKLGKGDWRGISKSYVPTRTPSQVASHAQKY 91
                     7**************************9988*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MKMKIGDHES AIRRSKSLGN LEIHDHNAVV DAGYLSDGPR NSKKGTSWTE EEHRSFLIGL  60
EKLGKGDWRG ISKSYVPTRT PSQVASHAQK YFIRIASNDK KKRRPSVFDV NLRDSNSQIP  120
SKTSSSSSPS ISKNMVPEVP KEASAPLEQL FDTCQIKGQA APCARPPLSP MTRPFGVPDL  180
RRMPYLMGVP RGLTAAKVIA PTVSWVPVFN FPPNQSHLNY RFAPFVARPP TTGLLSHLPP  240
PPQVQSQPGH STPVTNNDGL NISIGAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100104KKKRR
2100105KKKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.11e-43MYB_related family protein