PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03505 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 24096.5 Da PI: 4.3045 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 21 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +ykGVr +k +g+Wv+e+r p++ r r++lg+++tae+Aa+a +aa +l+ge OIT03505 21 KYKGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRGE 71 8*****999.*******999833...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MVKPIKSSDD ISSSSSSSSL KYKGVRKRKW GKWVSEVRLP NSRERIWLGS YDTAEKAARA 60 FDAAQFCLRG EAAKLNFPAN PPDILNGRSM SAAEIQVAAA RFANSDPEPQ ESISGPTDNS 120 DLSFSSSLSS SSELLHPESP STSISDGMVQ PDGELTEMPL DSEFLDLFFS LGTANNEYHF 180 GSFSEISDLT GDHFLPALND IDSGKEIYDG CTLDGSFLWN F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 29 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 5e-45 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03505 |