PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03460 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 549aa MW: 60293.2 Da PI: 6.511 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.4 | 9.3e-31 | 311 | 369 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ OIT03460 311 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 369 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MANGSGLFFD PDPTTLFLQY PSSKDHHFFN KLITQALSSN NYIMEAPTKN MSSPPPTTIQ 60 FPVNLINDHD QKRPVLDEMD FFAAKEGGNC KEDTDDRKEF NKPLELDFNI NTGLQLLTAN 120 TSSDQSIVED GLSPASSEDR RTKTELAVLQ AELERMNGEN RHLRDMLNQV TTNCSTLQMQ 180 LTILKQKQQH DHIEQDDKGE EIKQQYHQSS QMRPRQFMDL GRLADEPSLS SSEGRRSWEQ 240 SRSPPMNIVE SGSSDREDSP EKGLSCWGPN KVPRVVDNES KSSTTVDQAT EATIRKARVS 300 VRARSEAPMI TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDKTILIT 360 TYEGNHNHPL PPAAAAMAST TSSAARMLLS GSMPSADGLM SSNILARTLL PCSSSMATIS 420 ASAPFPTVTL DLTQNSNSLQ FKGPSNQFQF PFQNPHQNSP GNPIALLPQI FGQALYNQSK 480 FSGLQMSQNV STLPSIGDTV NALTADPNFA AALAAAVTSL IGNSHHSNNV TNNNTTAATT 540 PSNNNETKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04450.1 | 1e-123 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03460 |