PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03373 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27631 Da PI: 7.1649 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.1 | 1.4e-12 | 74 | 126 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++h e+Er+RR+++ + ++ Lr+ lP ++K s ++ +A +YI +Lq OIT03373 74 KKVMHREIERQRRQEMATLYASLRQQLPLE--IIKGKRSTSDHIFEAANYIEHLQ 126 6899*************************7..4*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDNFHSIFPL QQDVDDNNSH QLLYTNPCNF LYQQDLVTDF APLELDKNNQ KGNKAGKASA 60 ASLPVEKTSD DKQKKVMHRE IERQRRQEMA TLYASLRQQL PLEIIKGKRS TSDHIFEAAN 120 YIEHLQKNVR NLEDRREKLN KASNSSNRDY TISGSSSTTD SSSSTIVTVK QCLDGIEILV 180 NCGVESEGFR LSRVLQVLLQ QGLSIVNCSC TKTSTSLLHT IRTEVASQAG IDVHVIQQKL 240 SDISFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 1e-26 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03373 |