PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03325
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 474aa    MW: 52456.8 Da    PI: 5.765
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03325genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.37.1e-33249303155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k r+rWtpeLHe Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+
  OIT03325 249 KSRMRWTPELHEVFVEAVSKLGGSEQATPKGVLKLMNVEGLTIYHVKSHLQKYRT 303
               68****************************************************8 PP
2Myb_DNA-binding55.61.2e-17251302148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e +v+av +lGg    t+k + + m+ +g+t +++ks++qky+
         OIT03325 251 RMRWTPELHEVFVEAVSKLGGSeqaTPKGVLKLMNvEGLTIYHVKSHLQKYR 302
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MNMRRALCIQ RSSEAQHNNM GIRGAMSTSL SILPSLEEKY LKLPDSLHVL TEKEQSINLI  60
SSRAIPLASN SVTVGHQLSS TSGPHKDFHF SPTSSQESRP RSYPFISSEV SATTCQSSLS  120
SLCSASLDNY PMRNNNNSWS KDAYHDLTDF PTDVPVQNGQ VENLPVVMAS DDQTKRSDWQ  180
EWADQLINDD DALGSSWIEH LVDVNLLDPE PKLLGASEVL AFQPQPPPIA PSGQSCPVGS  240
PSSSTALTKS RMRWTPELHE VFVEAVSKLG GSEQATPKGV LKLMNVEGLT IYHVKSHLQK  300
YRTARYKPEP SEGIPEKKPA SVTEMPSLDL KMTMGITEAL RMQMEVQKQL HEQLEIQRKL  360
QLRIEEQGKY LEMMFERTKD MGKDLKVSSS LKTDEHPSPS SETKHSPPND KSEALEQEPV  420
SLNDASSSAG ELARGKNKEG NSLERKTCED HGSDVRDLCS TPSKRAKTEE TSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-84G2-like family protein