PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT03302 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 497aa MW: 55377.8 Da PI: 7.7083 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.3 | 5e-31 | 80 | 137 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg++WrKYGqK vkgs+fprsYY+Ct+++Cpv+kkve++ +++v+ei+Y+g Hnh+k OIT03302 80 DDGFTWRKYGQKRVKGSNFPRSYYKCTQQSCPVRKKVECAP-NGQVIEIVYNGAHNHPK 137 8****************************************.***************85 PP | |||||||
2 | WRKY | 102.5 | 2.3e-32 | 288 | 345 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYY+Ct agC v+k+ver++++ k v++tYeg+Hnhe OIT03302 288 EDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCIVRKHVERASDNLKSVITTYEGKHNHE 345 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 497 aa Download sequence |
MSSPPCRPAV LTIPPGISPA ALLDSPVTFP NSVAPTETNV QQTLNNIELT NKQISQQEEF 60 TKKENQFGFF SSSISPSSSD DGFTWRKYGQ KRVKGSNFPR SYYKCTQQSC PVRKKVECAP 120 NGQVIEIVYN GAHNHPKTQS IQRPSMDNSF VVRDVEEIGQ ENASVWRYQQ FECNKNVTSY 180 NANGLKRTSS ASVLTEVSDP MSTNPKSMNV FESAGTPELS STLTSYDGDD GDWATQEGTF 240 LGDDVNEYEL EPKRRKKESY SAEPSLLSRT VREPKVVLQV ESEIDILEDG YRWRKYGQKV 300 VKGNPNPRSY YKCTNAGCIV RKHVERASDN LKSVITTYEG KHNHEVPSTN KTNGVPGHIQ 360 SASTLNGQTN CMTSRKGPKG SNCRVQVQDL PFPFERKPFV GSEYLRPSFV GSYLGDLSFG 420 ACSLQLPNFP LPLPLPSRMS FPARLNEPPL DDFHLSNHHL LPNGASNSFL AVGNMQHIND 480 DNNNSSLLKA KEEIQWT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 252 | 258 | PKRRKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 1e-70 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT03302 |