PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02926
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 308aa    MW: 34058.1 Da    PI: 9.9519
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02926genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.4e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+  l  +v ++G+g W+tI +          R+  ++k++w++ 
         OIT02926  5 KLKWTPEEEVALRAGVLKYGPGKWRTILKDPEfsgvlYLRSNVDLKDKWRNM 56
                     689**********************************88***********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGAPKLKWTP EEEVALRAGV LKYGPGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMTVMA  60
NGWGSREKAK LALKRMIQAP MQDESSAAVT SAADSDAEIP EARPATTSRG SPQHGGSRRS  120
ILRLDNLIMD AISNLNEPGG SYQATISTYI EDHYWETPNF KRLLSAKLKY LTATGKLIKM  180
KRKYKVAPKL TFSDRRRNLP LPQLDSSQRI CSKVDQDDIN MLTRSQIDLD LEKMRNMSPQ  240
EAAAAAAQAV AEADTAIAEA AEAARKAEAA AAEAEAAQAF AEAAMKTLQE RSIPRMLVNM  300
VKKFVGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-83MYB_related family protein