PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02869 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27374.9 Da PI: 5.09 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8e-09 | 86 | 131 | 4 | 52 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 ++ rE+ RRdr+N++f eL ++l + + +K +K++iL A + + OIT02869 86 SKASREKLRRDRLNERFLELSSVLDPG---RPPKTEKVAILSDAQKMLI 131 5778**********************8...88**********9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEIDSSGNPN WLFDYELMTD ITSAASVAVA DFQSPATIDF SWPAQTIYAS SNLIAETDYT 60 FDDSEVSKEA SSRKRSRIEC CNSPRSKASR EKLRRDRLNE RFLELSSVLD PGRPPKTEKV 120 AILSDAQKML IELRAETQKL KDSNEELQEK IKELKAEKNE LRDEKQRLKE EKENLEQQVK 180 NLASKPGFLS HPSAMGAAFT AQGQVAGNKM MPFIGYPSVA MWQFMQPAVV DTSQDHVLRP 240 PVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 2e-87 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02869 |