PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02817 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 29122.3 Da PI: 7.7494 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.4e-17 | 56 | 105 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ + +r++lg+f tae A a+++a++k++g OIT02817 56 HYRGVRQRP-WGKYAAEIRDPK----KaARVWLGTFETAEAAGIAYDEAALKFKG 105 7********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MYSAARSQQD MSTMVSVLSQ VIGNTSSTAG NTLSHLSLQN QPQPNLQQGN IERRRHYRGV 60 RQRPWGKYAA EIRDPKKAAR VWLGTFETAE AAGIAYDEAA LKFKGNKAKL NFPERVLAKT 120 EFGYLTTNPQ EQLINIPAAN FLPNCNFKPF SQLQHYPHEL LRTGADSSRF NHISGFDPDI 180 LNTVELANSW LDPPLSSTSI ADSSSMTSLV QQASHDVQQA PSNYQQVDEN IVKFSSLFGN 240 ISSSRPSESS NNWEEFYYQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 5e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02817 |