PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02816
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family LBD
Protein Properties Length: 84aa    MW: 9485.73 Da    PI: 8.4823
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02816genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260104.31e-321484171
    DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearard 71
              +CaaCk+lrrkC+++ v+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rd
  OIT02816 14 PCAACKFLRRKCQPEYVFAPYFPPDQPQKFANVHKIFGASNVTKLLNELQPHQREDAVNSLAYEADMRLRD 84
              7*******************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MASSSSSSLS SYSPCAACKF LRRKCQPEYV FAPYFPPDQP QKFANVHKIF GASNVTKLLN  60
ELQPHQREDA VNSLAYEADM RLRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.32e-46LBD family protein