PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02645 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 27803.2 Da PI: 7.5395 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.3 | 2.7e-13 | 187 | 232 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++Le+AveY+k Lq OIT02645 187 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKFLQ 232 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MQRGSGGAGG GGSGLSRYCS APATWLEALL ESDTENEVVV NPSSPILHSP NKPPPHPSTT 60 QQQLPVLVKP ETRFTGDPGL FESGGSSNFL RQQSSPAEFL SHINSDGYFS SYGIPSSLNY 120 ISQPIKRPRE DDSESSPRKL SNHLKGEPSG QLRGSGGSLD AEMEKLMDDL VPCKVRAKRG 180 CATHPRSIAE RVRRTRISDR IRKLQELVPN MDKQTNTADM LEEAVEYVKF LQKQIQELME 240 HQKKCTCSEK DH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 7e-57 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02645 |