PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT02546

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 414aa MW: 46637.6 Da PI: 9.7748

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT02546	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.4e-32	225	278	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OIT02546 225 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 278 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.2e-15	226	277	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OIT02546 226 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 277 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MELFPAQPDL SLQISPPNSK PSSTNWKRSS NKSTTEDEKD LMFWRRALES RNSNTSSLSK 60 PHNNNNNNNN NNNNNNNNNN TSLFELSLSN PKPTPEFKSG PFHHIQNTHN NFIHSLQQNQ 120 GLNSELCFLR PIRGIPVYHQ NPPPPPPTSH YPIFGQQTFD NTSTAATLPI RSSGCCINNN 180 NNKTMSNSSS SRIPFHTSQQ YHHQAGVMRS RFLSRFPAKR TMRAPRMRWT SSLHARFVHA 240 VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDRVAVPAS SGQSEVFDNG 300 SSGDTSEDLI PDIENSRKSD LSDQQAKNNN MHLQDKDYHG LWSNSSSRES WQLHGKLGDY 360 PGNIPSLEKL QHKEMEGKCL SYDRISGEVS SSSITETSPK KKPNLEFTLG RPSQ

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MELFPAQPDL SLQISPPNSK PSSTNWKRSS NKSTTEDEKD LMFWRRALES RNSNTSSLSK  60
PHNNNNNNNN NNNNNNNNNN TSLFELSLSN PKPTPEFKSG PFHHIQNTHN NFIHSLQQNQ  120
GLNSELCFLR PIRGIPVYHQ NPPPPPPTSH YPIFGQQTFD NTSTAATLPI RSSGCCINNN  180
NNKTMSNSSS SRIPFHTSQQ YHHQAGVMRS RFLSRFPAKR TMRAPRMRWT SSLHARFVHA  240
VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDRVAVPAS SGQSEVFDNG  300
SSGDTSEDLI PDIENSRKSD LSDQQAKNNN MHLQDKDYHG LWSNSSSRES WQLHGKLGDY  360
PGNIPSLEKL QHKEMEGKCL SYDRISGEVS SSSITETSPK KKPNLEFTLG RPSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-69	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT02546