PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02465 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 405aa MW: 46045.5 Da PI: 7.3095 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.9 | 8.5e-32 | 233 | 287 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rFve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR OIT02465 233 KTRIRWTQDLHDRFVECVNRLGGADKATPKAILKLMESDGLTIFHVKSHLQKYRN 287 68****************************************************6 PP | |||||||
2 | Myb_DNA-binding | 47.8 | 3.4e-15 | 237 | 286 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++++v++v++lGg t+k+I + m g+t ++ks++qky+ OIT02465 237 RWTQDLHDRFVECVNRLGGAdkaTPKAILKLMEsDGLTIFHVKSHLQKYR 286 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MSIQRIGTQE RVPKNSAYPS DYTLEFARMP VQALHAQKQS SSYMGFSLPP ATSAEDVCQQ 60 QQQQQFFPSA NSSSNSTIIG RIGSPSSAFF ATERYLGLTQ YDDQQDNCSQ LSKNYDFQIP 120 SYGFLPDSPA EDFHPKISLP PFIRSQFSTS QPFSPDHQVP YRSPFSSLTE KERILHLKRK 180 LLGEFDTPFD GNQDFSLPHN LCGSHLDYMR QESGFPSANS NNSACSGGSV CNKTRIRWTQ 240 DLHDRFVECV NRLGGADKAT PKAILKLMES DGLTIFHVKS HLQKYRNAKY IPEPTDGKSE 300 KRNCPNNVSQ IDSKTGMQIK EALQMQLEVQ RRLHEQLEIQ RKLQLRIEEQ GKQLKMIFDQ 360 QQRTTRSLLD TQNSTISTPE HDPSNLYDDM EVLVADNIRF PSKIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 9e-73 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02465 |