PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02317 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WOX | ||||||||
Protein Properties | Length: 246aa MW: 27860.1 Da PI: 8.2159 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.2e-20 | 19 | 78 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le+ +++ r+psae++++++ +l +++ ++V++WFqN++a++++ OIT02317 19 SRWNPTKEQIDLLESIYRQgIRTPSAEQIQQITLRLrafgHIEGKNVFYWFQNHKARQRQ 78 6*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.3 | 6e-37 | 18 | 80 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +RW+Pt+eQi +Le++y++G+rtP++e+iq+it +L+++G+ie+kNVfyWFQN+kaR+rqkq OIT02317 18 GSRWNPTKEQIDLLESIYRQGIRTPSAEQIQQITLRLRAFGHIEGKNVFYWFQNHKARQRQKQ 80 58***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MNDDNNSVEM LASDTPVGSR WNPTKEQIDL LESIYRQGIR TPSAEQIQQI TLRLRAFGHI 60 EGKNVFYWFQ NHKARQRQKQ KQDKFAYFNH FLHRTNVFPP PRPNVVCGPY YTPQNNLGFY 120 QQYPVPSLIL PGPGGFKRRA TCDAAVYINA TYSQENSNNM AHLSPNAKQF NHQETLNLFP 180 LHPTGILQEK TTSSSSPSAH DQSTIPSNYT PSNFVEANCF TDLGIGAGDH QVFNFLCGKG 240 PCESQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 9e-39 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02317 |