PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02229
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 322aa    MW: 35750.8 Da    PI: 10.1008
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02229genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.79.1e-32251308359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  OIT02229 251 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 308
               99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAVELMMDYR NTRNCTLVTA NLEEKTVVQE AASGLESVEK LIRLLSQTQS QQIQQQKQGY  60
LEQKNSPMEI EMVADAAVTK FKKVISLLDR NRTGHARFRR APVASSPCQN PSKDYVDTKV  120
YSPTPIQQIP LCQQLSLVPK TISFSYSPEN TSRTNSFNIS TLTGETESKQ QSSSSAFQIT  180
NLSQVSNSAG KPPLSSSSLK RKCSLSENAV SGKCSTGSSG RCHCSKRRKL RLKRVVRVPA  240
ISMKMADIPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA LDDPTMLIVT  300
YEGEHNHSLL VAKTSSLILE SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.13e-75WRKY family protein