PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02091
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 329aa    MW: 36561.4 Da    PI: 6.1911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02091genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.82.5e-154594255
              HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
              r +h+  E+rRR++iN++f+ Lr+l+P+     ++K + a+ L ++++Y+++Lq
  OIT02091 45 RSKHSVTEQRRRSKINERFQILRDLIPHT----DQKRDTASFLLEVIQYVQYLQ 94
              899*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MKGVKGHLEE EEEEEDEVGL KKDATPPSSS NTKDGKNNDK ASAIRSKHSV TEQRRRSKIN  60
ERFQILRDLI PHTDQKRDTA SFLLEVIQYV QYLQEKVQKH EGSYQPWSSE PTKLMPWRNS  120
HWRMQNLPAH PQALKNGSGP ESTYLGGFDE NPATVTSTVQ PNQQNLIESH PIRDVSIKAM  180
DQHNDLANKA IATHMPLQAG MPVAVPNNSA FSDSQPRPVS DQCPNTVDAL NHHEDLTIDG  240
GTISISSPYS QGLLNSLTQA LENTGLDLSQ ATISVQINFG KRADRGMTSG PSIAKDNENP  300
PPSGNQHMDH FREANNDEAL DQAQKRLKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-95bHLH family protein