PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01955
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 313aa    MW: 34939.1 Da    PI: 6.5158
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01955genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.75.5e-28150202255
   G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               +rl+Wtp+LH+rF+e+v++L G+++A+Pkti++lm+v+gL +e+v+SHLQkYRl
  OIT01955 150 ARLVWTPQLHKRFIEVVAHL-GIKNAVPKTIMQLMNVEGLKRENVASHLQKYRL 202
               79******************.********************************8 PP
2Myb_DNA-binding42.61.4e-13151201148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT++++++++++v+ lG +   +ktI++ m+ +g+ ++++ s++qky+
         OIT01955 151 RLVWTPQLHKRFIEVVAHLGIKnaVPKTIMQLMNvEGLKRENVASHLQKYR 201
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGEEVKLSEY DSSGGNNDDR VLWEVGLPGA DDLTPLTLQL IPAELASAFR ISPESSKSMT  60
DVNRASQNTF SSLQRWHSQD MSSMNNSNFK LFNEETTVTE KDETDLTREG SDPRKLRRVE  120
SGGTEEIESA LCNENCADDS SANKTLNKRA RLVWTPQLHK RFIEVVAHLG IKNAVPKTIM  180
QLMNVEGLKR ENVASHLQKY RLYMKRQGNE GPSSSDHLLN STPVKQSLRE SGESGHYLRN  240
TNGHVGMPTQ MPYPPQMVQM PMPMIGMANG GMPVGYGGGP SVGFHHQYSM MQQQREWSGN  300
NFGYYHPVAS NDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-66G2-like family protein