PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01885

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 368aa MW: 40981.3 Da PI: 8.3465

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01885	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl OIT01885 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.5e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ OIT01885 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MFHAKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSVK DGDRATSLEL QRNLASSSGM 120 IGRNMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQTI LEKACQTLGG EENMALPART 180 FKGMGNQGGG IIPDISAAFK EFGTPPLSFS SFQDLNICGG QEQQLELHPQ SSMGERSSSF 240 ESFLVGNNNN NTDHNLSLGK KRSSPYSNGG NANGKSPLMW SDDFRLQELG GPTTDLISRP 300 NQDDIIQMAP LSMERSCNPE LDSVSDIYES KPMLDEKKFD AKLERPSPRR APQLSSLSAQ 360 GGRNSVFG

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MFHAKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSVK DGDRATSLEL QRNLASSSGM  120
IGRNMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQTI LEKACQTLGG EENMALPART  180
FKGMGNQGGG IIPDISAAFK EFGTPPLSFS SFQDLNICGG QEQQLELHPQ SSMGERSSSF  240
ESFLVGNNNN NTDHNLSLGK KRSSPYSNGG NANGKSPLMW SDDFRLQELG GPTTDLISRP  300
NQDDIIQMAP LSMERSCNPE LDSVSDIYES KPMLDEKKFD AKLERPSPRR APQLSSLSAQ  360
GGRNSVFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-127	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT01885