PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01818

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 353aa MW: 39501.2 Da PI: 8.6875

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01818	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.8	1e-53	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ ++++v OIT01818 16 LPPGFRFHPTDEELVVHYLKKKAASVPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTAgGTQKV 115 79**************************.88***********988899************************************9977788 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy g+ pkg+kt+W+mheyrl OIT01818 116 GVKKALVFYGGKPPKGVKTNWIMHEYRL 143 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MESTDSSSGS HQQPQLPPGF RFHPTDEELV VHYLKKKAAS VPLPVAIIAE VDLYKFDPWE 60 LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120 LVFYGGKPPK GVKTNWIMHE YRLADNKPNN KPPGCDVANK KSLRLDDWVL CRIYKKNNTQ 180 RPIEQERDDL NDIMGSSIPA TCIPNNSMSI FGQPKANSNY TTLLETHDQN IYDQGMQFSS 240 KSSTQFPVNV LSTSSSVLPS KRSLNGLYWN EEAAANDNSQ STKRFLAENI NNMDDGLSMN 300 VRSDHEQNGS IASLLSQLPQ TPSLQQQQQQ QILQGSLSDG VFRQPYSGMN WYS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MESTDSSSGS HQQPQLPPGF RFHPTDEELV VHYLKKKAAS VPLPVAIIAE VDLYKFDPWE  60
LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA  120
LVFYGGKPPK GVKTNWIMHE YRLADNKPNN KPPGCDVANK KSLRLDDWVL CRIYKKNNTQ  180
RPIEQERDDL NDIMGSSIPA TCIPNNSMSI FGQPKANSNY TTLLETHDQN IYDQGMQFSS  240
KSSTQFPVNV LSTSSSVLPS KRSLNGLYWN EEAAANDNSQ STKRFLAENI NNMDDGLSMN  300
VRSDHEQNGS IASLLSQLPQ TPSLQQQQQQ QILQGSLSDG VFRQPYSGMN WYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-111	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT01818