PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT01770 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 111aa MW: 12350.7 Da PI: 4.604 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 59.8 | 5.5e-19 | 2 | 45 | 9 | 51 |
G2-like 9 eLHerFveaveqLGGs.ekAtPktilelmkvkgLtlehvkSHLQ 51 e H++Fveav++LGG+ +AtPk+i++lm+ +++t h+kSHLQ OIT01770 2 EVHDHFVEAVNELGGPfAEATPKNIMKLMDNEDITSGHIKSHLQ 45 79*************8579************************* PP | |||||||
2 | Myb_DNA-binding | 29.8 | 1.4e-09 | 4 | 47 | 9 | 47 |
HHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqky 47 ++ +v+av++lGg+ t+k I++ m + t ++ks++q OIT01770 4 HDHFVEAVNELGGPfaeaTPKNIMKLMDnEDITSGHIKSHLQVT 47 789**************************************976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 111 aa Download sequence |
MEVHDHFVEA VNELGGPFAE ATPKNIMKLM DNEDITSGHI KSHLQVTKEA EQKENVEAEE 60 IARQEMQADA AARIELQMKE GKEHLDLNFP AAAPDQDSRN REPKSSGSKN A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G29000.2 | 5e-11 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT01770 |