PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01744
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 314aa    MW: 35443.2 Da    PI: 7.1233
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01744genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.71e-32187244259
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               +Dgy+WrKYGqK vk+s+fpr+YYrCt+++C+vkk+vers edp++v++tYeg+Hnh 
  OIT01744 187 EDGYRWRKYGQKAVKNSPFPRNYYRCTTQKCNVKKRVERSYEDPSIVITTYEGQHNHY 244
               8********************************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSNNPFYHDY MGTEGINTFP FFGENPASNY DHTPPNNIQN PHQQFVPSSY MTLTECLHSS  60
MDYNTLSSAF GMSCSSSEVV CPQVDRHDYS SRKSSVVSAT EPVLDSPLEG TSVEIPPTTN  120
SSISSTSNEA GGEEDSSKIK KLMQGKGCQE EGDDKSKKES KAKKKGEKKP KEARFAFMTK  180
SEIDNLEDGY RWRKYGQKAV KNSPFPRNYY RCTTQKCNVK KRVERSYEDP SIVITTYEGQ  240
HNHYCPATLR GNAASMFSPS FLSSSHLMQN FPPEIFAHML NPTSNQNLLI NSPYNYHQHQ  300
SQEYGSWIHK PETS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.18e-47WRKY family protein