PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01678

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 402aa MW: 46854.3 Da PI: 9.0814

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01678	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.8e-32	99	152	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ OIT01678 99 PRLRWTPELHRSFVHAIERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 152 8****************************************************7 PP
2	Myb_DNA-binding	47.3	4.8e-15	100	151	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+a+++lGg t+k++ + m+ g++ ++ks++q+y+ OIT01678 100 RLRWTPELHRSFVHAIERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 151 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MTENSVKQTN EEMMKNTMEY IMEKTSSDSS SQSKMVSFID LNEDNKGESD EEEEVIEISV 60 ENSSEKTTDE GNSENNNNSS GNGGVEKKNV RHYVRSKMPR LRWTPELHRS FVHAIERLGG 120 QERATPKLVL QLMNVRGLSI AHVKSHLQMY RSKKLDESGQ VLGRNYRAMQ GRSYFYGNVG 180 QRYNPLQDFK MKNGAIVLAR NFNYDHDHVK GHVRNSFSRP PYQAKDIFSR YLQWSSNQGS 240 LLNTTREKLC TPRQFQKNGG HEIGPIRSSQ FLEEKRWPPS EFIANQLQEK IADFSNICSA 300 KNSQYLLQQN VTQPYSKWNC RYNTLEQNFE TPKRLEMKED KSFLGKDWLP DLQLRLSRST 360 ENKNEKNTHH NKRMDHQSEM NTMLSLSLPT YSLSETYEKV EF

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MTENSVKQTN EEMMKNTMEY IMEKTSSDSS SQSKMVSFID LNEDNKGESD EEEEVIEISV  60
ENSSEKTTDE GNSENNNNSS GNGGVEKKNV RHYVRSKMPR LRWTPELHRS FVHAIERLGG  120
QERATPKLVL QLMNVRGLSI AHVKSHLQMY RSKKLDESGQ VLGRNYRAMQ GRSYFYGNVG  180
QRYNPLQDFK MKNGAIVLAR NFNYDHDHVK GHVRNSFSRP PYQAKDIFSR YLQWSSNQGS  240
LLNTTREKLC TPRQFQKNGG HEIGPIRSSQ FLEEKRWPPS EFIANQLQEK IADFSNICSA  300
KNSQYLLQQN VTQPYSKWNC RYNTLEQNFE TPKRLEMKED KSFLGKDWLP DLQLRLSRST  360
ENKNEKNTHH NKRMDHQSEM NTMLSLSLPT YSLSETYEKV EF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-35	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT01678